Irish Rail says the line has re-opened between Raheny and Howth/Malahide following an earlier security alert.
It says full services are resuming, but there will be some delays.
Services were stopped for a time to facilitate a garda operation at Kilbarrack.
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It came after a suspect bomb was found on a rail line.
Barry Kenny from Irish Rail says the matter is being dealt with by gardaí and the Defence Forces.